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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs7962321 chr12:9807073 C/T 0.000125 67 7.6 21.8 27.88 KM Plot
UVM rs7965019 chr12:132604248 A/G 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs7967102 chr12:9770749 C/T 0.00014 66 27.37 21.8 7.6 KM Plot
UVM rs7973603 chr12:9807553 C/T 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs7974299 chr12:132613274 C/T 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs7974871 chr12:9816703 G/T 0.000125 67 7.6 21.8 27.88 KM Plot
UVM rs7976530 chr12:132609140 C/T 4.29E-7 67 27.92 24.87 0.73 KM Plot
UVM rs7978187 chr12:9816875 T/G 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs79889771 chr20:30235159 A/G 6.36E-5 67 27.92 8.25 7.6 KM Plot
UVM rs8025458 chr15:40842299 G/A 0.000236 67 27.9 24.82 16.78 KM Plot
UVM rs8026523 chr15:40654066 G/T 5.12E-7 66 26.55 24.87 1.27 KM Plot
UVM rs8027487 chr15:40654067 T/A 5.12E-7 66 26.55 24.87 1.27 KM Plot
UVM rs8032285 chr15:29413378 A/G 0.000147 65 7.6 31.27 25.77 KM Plot
UVM rs8033303 chr15:40649700 C/T 7.25E-7 65 26.6 21.13 1.27 KM Plot
UVM rs8037207 chr15:40655500 G/A 5.12E-7 66 26.55 24.87 1.27 KM Plot